Healthy blueberry bran muffins are the perfect way to reset after a vacation. While I do enjoy a meal prepared by someone else, it’s always better for me to get back to eating at home.
After an indulgent two-week road trip where we splurged on everything imaginable, returning to a regular routine feels essential. That’s why I turn to this recipe for healthy blueberry bran muffins. They make an excellent light breakfast or afternoon snack, packed with fiber and wholesome ingredients.
Muffins don’t have to be heavy or loaded with sugar. When prepared with nutritious components, like in these healthy blueberry bran muffins, they offer balanced indulgence. Full of fiber, natural sweetness, and whole grains, these muffins are simple to make, family-approved, and guilt-free.
How to Make Healthy Blueberry Bran Muffins
Making healthy blueberry bran muffins is a simple and rewarding process. With just a few easy steps, you’ll have a batch of delicious muffins ready to enjoy. These muffins are packed with fiber, natural sweetness, and wholesome ingredients that will keep you feeling satisfied throughout the day. Follow along to see how easy they are to make!
Step 1: Prepare the Bran Mixture
To make these healthy blueberry bran muffins, you’ll first need to start with a medium-sized bowl and soak 1 1/2 cups of flaked bran with 1 cup of almond milk for 10 minutes.
Make sure to use the flaked bran (like raisin bran) and not the thick, stick-like bran. Flaked bran cooks better.

You can also use whatever milk you prefer in this recipe. I have also used low-fat milk and soy milk in this recipe and the muffins have turned out fine.
Step 2: Mix the Dry Ingredients
In a separate bowl, mix together the following ingredients:
- 1/4 cup flax seed.
- 1 Tbsp chia seeds.
- 1 tsp each baking powder and baking soda.
- 1 cup whole wheat flour.
- 1/2 tsp salt.
Stir the ingredients well to ensure everything is evenly distributed. The combination of flax seed, chia seeds, and whole wheat flour forms a nutrient-dense base full of fiber and omega-3s.

Step 3: Combine the Wet Ingredients
Now it’s time to bring some moisture and flavor into your healthy blueberry bran muffins by mixing the wet ingredients. These ingredients bind everything together add a natural sweetness and richness to the muffins. Make sure your coconut oil is melted and at room temperature before combining to prevent it from clumping.
- 1 egg (in the pictures I was doubling the recipe).
- 1/2 tsp vanilla extract.
- 2/3 cup local honey.
- 1/4 cup applesauce (you can use one of those snack packs).
- 1/4 cup coconut oil melted.
Once these wet ingredients are mixed thoroughly, you’ll notice the batter starting to come together with a smooth and glossy texture.

Step 4: Mix Everything Together
Once all those ingredients are combined, add in the bran that has been soaking and 1 cup of fresh blueberries.

The batter of the healthy blueberry bran muffins may seem thin, but it will bake up well, I promise.

Step 5: Bake to Perfection
You’ll need about 18 cupcake liners filled about 3/4 of the way full.

Pop these in an oven heated to 375 degrees and bake for 25–30 minutes.

You’ll know the healthy blueberry bran muffins are done when you can smell them baking and when they spring back to the touch.
Why These Muffins Are a Family Favorite
I love these healthy blueberry bran muffins! They taste wonderfully and don’t make you feel guilty when eating one! I regularly serve brunches for my customers, and this recipe for healthy blueberry bran muffins is always a hit. Even my kids gobble these down for breakfast or as a snack.

If you think you’ll like this recipe for Healthy Blueberry Bran Muffins, you’ll love my recipe for extra fluffy blueberry muffins! This is my most viewed recipe on my website!

Enjoy and happy cooking y’all!


Healthy Blueberry Bran Muffins
Ingredients
Method
- In a medium bowl, soak flaked bran in almond milk for 10 minutes.
- In a separate bowl, mix together flax seed, chia seeds, baking powder, baking soda, whole wheat flour, and salt.
- In another bowl, whisk together the egg, vanilla extract, honey, applesauce, and melted coconut oil until combined.
- Add the wet ingredients to the dry ingredients and mix until just combined.
- Stir in the soaked bran mixture and gently fold in the blueberries.
- Line 18 muffin cups with paper liners and fill each about 3/4 full with the batter.
- Bake at 375°F (190°C) for 25–30 minutes, or until muffins spring back to the touch.
- Remove from oven and let cool before serving.